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Mississippi Mud Cupcakes (Fudgy Chocolate Cupcakes with Marshmallow and Fudge Frosting)

These Mississippi Mud Cupcakes are rich, fudgy, and packed with deep chocolate flavor, topped with gooey marshmallows and a glossy fudge frosting. With a soft, slightly dense crumb and that signature “mud” texture, these bakery-style cupcakes are perfect for chocolate lovers.
Course Dessert
Cuisine American
Keyword chocolate cupcakes, fudgy cupcakes, marshmallow cupcakes, Mississippi Mud Cupcakes, southern desserts
Prep Time 20 minutes
Cook Time 18 minutes
Total Time 38 minutes
Servings 12 cupcakes
Calories 400kcal
Cost $10 for entire recipe

Equipment

  • 12-cup muffin pan – for evenly sized cupcakes
  • Cupcake liners – prevents sticking and makes cleanup easy
  • Mixing bowls (2–3) – for separating wet and dry ingredients
  • Whisk – for smooth batter and cocoa blooming
  • Rubber spatula – for folding and scraping batter
  • Measuring cups and spoons – for accurate ingredient portions
  • Kitchen scale (optional but recommended) – for precise baking measurements
  • Saucepan – to prepare the fudge frosting
  • Cooling rack – allows cupcakes to cool evenly
  • Spoon or offset spatula – for spreading the frosting smoothly

Ingredients

Chocolate Cupcakes

  • ¾ cup 92g all-purpose flour
  • ½ cup 50g cocoa powder (natural or Dutch-process)
  • ¾ tsp baking soda
  • tsp baking powder
  • ½ tsp salt
  • ¾ cup 150g granulated sugar
  • ½ cup 100g brown sugar
  • cup 80ml / ~70g vegetable oil
  • 2 tbsp 28g melted butter
  • ¼ cup 60g sour cream
  • 2 large eggs room temperature
  • 1 tsp vanilla extract
  • ½ cup 120ml buttermilk (room temperature)
  • cup + 1 tbsp 95ml hot coffee

Marshmallow Layer

  • cups mini marshmallows 75–85g

Fudge Frosting

  • ½ cup 115g unsalted butter
  • ¼ cup 60ml milk
  • ¼ cup 25g cocoa powder
  • cups 270g powdered sugar, sifted
  • 1 tsp vanilla extract
  • Pinch of salt
  • 1 tbsp corn syrup optional, for gloss

Instructions

Prepare

  • Preheat oven to 350°F (175°C). Line a 12-cup muffin pan with cupcake liners.

Bloom Cocoa

  • In a bowl, whisk together cocoa powder and hot coffee until smooth.
  • Whisk in buttermilk and sour cream until fully combined.

Make Batter

  • In a separate bowl, whisk sugars, oil, melted butter, eggs, and vanilla until smooth.
  • Mix in the cocoa mixture.
  • Add flour, baking soda, baking powder, and salt.
  • Fold until just combined—do not overmix.

Bake

  • Divide batter evenly (about ¼ cup per liner, ¾ full).
  • Bake for 16–19 minutes, or until a toothpick inserted shows moist crumbs.
  • Let cupcakes cool for 2 minutes.

Add Marshmallows

  • Top each cupcake with mini marshmallows and gently press.
  • Return to oven for 1–2 minutes, until marshmallows are puffed (not melted flat).
  • Cool cupcakes for 10–15 minutes.

Make Fudge Frosting

  • In a saucepan over medium heat, melt butter.
  • Whisk in milk and cocoa powder until smooth. Remove from heat and let cool for 2 minutes.
  • Stir in vanilla and corn syrup (if using).
  • Gradually whisk in powdered sugar until smooth and glossy.

Assemble

  • Spoon frosting over marshmallows and gently spread.
  • Serve slightly warm or at room temperature.

Notes

  • Do not overbake the cupcakes – removing them when a toothpick shows moist crumbs ensures the soft, fudgy “Mississippi mud” texture instead of a dry, cakey result.
  • Blooming the cocoa powder with hot coffee enhances the deep chocolate flavor without making the cupcakes taste like coffee. This step is key for rich chocolate cupcakes.
  • Use room temperature ingredients (eggs, buttermilk, sour cream) for a smoother batter and more even baking.
  • Mix just until combined once the flour is added. Overmixing can make the cupcakes dense and tough instead of soft and tender.
  • Mini marshmallows should be lightly melted, not fully dissolved—only heat until they puff to keep that classic gooey layer.
  • Fudge frosting texture matters: it should be thick, glossy, and spreadable. If it becomes too thick, add a small splash of warm milk; if too thin, let it sit for a few minutes to thicken.
  • Corn syrup is optional but helps create a shiny, soft frosting that stays smooth longer—great for presentation and photos.
  • Natural cocoa powder gives slightly better rise, but Dutch-process cocoa works well for a smoother, milder chocolate flavor.
  • For a traditional Mississippi Mud finish, sprinkle chopped pecans or walnuts over the frosting after spreading.
  • These cupcakes taste best slightly warm or at room temperature, when the marshmallow layer is soft and the frosting is perfectly fudgy.